DNA Data File for HIV007

LOCUS       HIVNE007      851 bp ss-RNA             VRL       23-JAN-1991

DEFINITION  Human immunodeficiency virus type 1 nef gene, complete cds.

ACCESSION   M58179

KEYWORDS    nef protein.

SOURCE      Human immunodeficiency virus type 1 quasispecies L1 viral RNA,

            clone L1.07.

  ORGANISM  Human immunodeficiency virus type 1

            Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;

            Retroviridae; Lentivirinae.

REFERENCE   1  (bases 1 to 851)

  AUTHORS   Delassus,S., Cheynier,R. and Wain-Hobson,S.

  TITLE     Evolution of human immunodeficiency virus type 1 nef and long

            terminal repeat sequences over 4 year in vivo and in vitro

  JOURNAL   J. Virol. 65, 225-231 (1991)

  STANDARD  full automatic

FEATURES             Location/Qualifiers

     CDS             1. .621

                     /gene="nef"

                     /product="nef protein"

                     /codon_start=1

                     /translation="MGGKWSKSSKIGWPTIRERMKQAEPAADGVGAVSRDLEKHGAIT

                     SSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTRRAAIDLSHFLREKGGLEGLVH

                     SQKRQEILDLWVYHTQGYFPDWQNYTPGPGTRWPLTFGWCFKLVPVEPEQVEEANEGE

                     NNSLLHPMSQHGMEDPEKEVLVWKFDSSLAFHHKARELHPEYYKDC"

BASE COUNT      239 a    183 c    248 g    181 t

ORIGIN



 Hivne007  Length: 851  July 11, 1993  14:18  Type: N  Check: 4726  ..



       1  ATGGGTGGCA AATGGTCAAA AAGTAGTAAG ATTGGATGGC CTACTATAAG 



      51  GGAAAGAATG AAACAAGCTG AGCCAGCAGC AGATGGGGTG GGAGCAGTAT 



     101  CTCGAGACCT GGAAAAACAT GGAGCAATCA CAAGTAGCAA TACAGCAGCT 



     151  ACTAATGCTG ATTGTGCCTG GCTAGAAGCA CAAGAGGAGG AAGAAGTGGG 



     201  TTTTCCAGTC AGACCTCAGG TACCTTTAAG ACCAATGACT CGCAGGGCAG 



     251  CTATAGATCT TAGCCACTTT TTAAGAGAAA AGGGGGGACT GGAAGGGCTA 



     301  GTTCACTCCC AAAAAAGACA AGAGATCCTT GATCTGTGGG TCTACCACAC 



     351  ACAAGGCTAC TTCCCTGATT GGCAGAACTA CACACCAGGG CCAGGGACCA 



     401  GATGGCCACT GACCTTTGGA TGGTGCTTCA AGCTAGTACC AGTTGAGCCT 



     451  GAGCAGGTAG AAGAGGCCAA TGAAGGAGAG AACAACAGCT TGTTACACCC 



     501  TATGAGCCAG CATGGGATGG AGGACCCGGA GAAAGAAGTG TTAGTGTGGA 



     551  AGTTTGACAG CAGCCTAGCA TTTCATCACA AGGCCCGAGA GCTGCATCCG 



     601  GAGTATTACA AAGACTGCTG ACATCGAGTT TTCTACGAGG GACTTTCCGC 



     651  TGGGGACTTT CCAGGGAAGC GTGGCCTGGG CGGGACTGGG GAGTGGCGAG 



     701  CCCTCAGATG CTGCATATAA GCAGCTGCTT TTTGCCTGTA CTGGGTCTCT 



     751  CTGGTTAGAC CAGATCTGAG CCTGGGAGCT CTCTGGCTAG CTAGGGAACC 



     801  CACTGCTTAA GCCTCAATAA AGCTTGCCTT GAGTGCTTCA AGTAGTGTGT 



     851  G